2.3 Manual Cleaning Methods

Key Takeaways

  • Cleaning physically removes soil and bioburden and must precede every disinfection and sterilization step
  • The manual cleaning sequence is sort/disassemble, pre-rinse cool, soak, wash submerged, rinse, then inspect
  • Initial rinsing uses cool to lukewarm water (below 110°F/43°C) because hot water coagulates blood proteins onto the surface
  • Instruments must be fully submerged while scrubbing to prevent aerosolizing contaminated droplets
  • Lumen brushes must match the channel diameter so bristles contact the full inner surface
  • Enzymatic detergents use protease, lipase, and amylase to break down organic soil but are not disinfectants
  • Final rinsing uses treated or critical water to remove detergent residue that could interfere with sterilization or harm patients
  • Brushes and cleaning tools are themselves decontaminated and replaced regularly, and single-use lumen brushes are preferred
Last updated: June 2026

Manual cleaning is the cornerstone of decontamination. The guiding rule of the entire CS profession is that an item that is not clean cannot be disinfected or sterilized — soil shields microorganisms from heat, chemicals, and steam. Even where automated washers exist, many items require manual cleaning because of their design, material, or IFU, and heavily soiled items are pre-cleaned manually before automated processing.

When Manual Cleaning Is Required

  • Instruments with dried or hardened soil (may need pre-soaking).
  • Delicate items that automated washers could damage (microsurgical, ophthalmic, fiber-optic).
  • Complex designs — lumens, hinges, ratchets, box locks, moving parts.
  • When automated equipment is unavailable or out of service.
  • When the manufacturer IFU specifies manual cleaning.
  • Items requiring pre-cleaning before the washer-disinfector.

The Manual Cleaning Sequence

Step 1 — Sort and disassemble

Open all hinged instruments; disassemble multi-part devices per IFU; separate sharps and delicate items; group similar instruments for efficiency.

Step 2 — Pre-rinse (cool water)

Rinse under cold to lukewarm water (below 110°F / 43°C) to flush gross soil. Hot water makes blood proteins denature and coagulate — like cooking an egg — bonding them permanently to the surface. Flush lumens with a syringe or irrigation adapter.

Step 3 — Soak (if needed)

Soak in enzymatic detergent per IFU (often 1-10 minutes). Do not over-soak — prolonged exposure can harm finishes and promote corrosion. Change the solution frequently; once heavily soiled it loses effectiveness.

Step 4 — Wash / scrub (submerged)

Keep instruments below the water surface while scrubbing to prevent aerosolization — contaminated droplets that the technician could inhale. Use the right brush: lumen brushes sized to the channel, detail brushes for box locks and ratchets, soft-bristle brushes for delicate surfaces. Scrub interior and exterior, working from least to most soiled.

Step 5 — Rinse

Rinse thoroughly with treated/critical water to remove all detergent. Residue can interfere with sterilization, cause patient tissue reactions, and leave deposits that attract new soil. Flush every lumen completely.

Step 6 — Inspect

Visually check each item (use magnification when available) for remaining soil, and verify function: scissors cut paper cleanly, hemostats and ratchets hold, jaws align. If soil remains, repeat the entire cleaning process.

Water Temperature Guide

StepTemperatureRationale
Pre-rinseCool to lukewarm (<110°F / 43°C)Prevents protein coagulation
Enzymatic soakPer IFU (often 80-110°F / 27-43°C)Activates enzymes
Final rinsePer IFURemoves detergent residue

Key rule: Never use hot water for the initial rinse. Heat fixes blood protein onto the metal, making it nearly impossible to remove later.

Cleaning Chemistry

Water chemistry matters: pH and water hardness affect detergent performance and instrument life. Detergents are chosen to match the soil and the instrument:

TypepHPropertiesBest For
EnzymaticNear-neutralProtease, lipase, amylase break down soilBlood, tissue, fats — general instruments
Neutral6-8Gentle on instrumentsDelicate items; common default
Alkaline8-14Aggressive; saponifies fatsHeavy or baked-on soil
Acidic1-6Dissolves mineralsDescaling, hard-water deposits, rust stains

Enzymatic detergent facts

  • Protease digests proteins (blood), lipase digests fats, amylase digests starches.
  • Optimal activity is at lukewarm temperatures — water too hot denatures the enzymes and destroys cleaning power; too cold slows them.
  • Prepare fresh per IFU; enzymatics clean but do not disinfect.
  • Always rinse thoroughly afterward.

Brush Selection and Care

BrushUseNotes
Lumen brushInternal channelsMust match channel diameter; too small leaves a soil ring
Detail brushBox locks, ratchets, serrationsReaches recessed areas
Nylon bristleGeneral cleaningLeast likely to scratch
Stainless bristleHeavily soiled stainless onlyCan scratch softer metals

Inspect brushes daily for bent or missing bristles; decontaminate after each use (run through the washer-disinfector); replace per policy; prefer single-use lumen brushes when possible.

Worked Scenario and Traps

Scenario: A technician fills the sink with hot tap water, drops in a tray of bloody hemostats closed, and scrubs them above the waterline. Three errors: hot water coagulated the blood, the closed box locks trapped soil, and scrubbing above the surface aerosolized contaminants. Correct practice is cool pre-rinse, open hinges, and fully submerged scrubbing.

Common traps: assuming the washer makes manual cleaning unnecessary for complex devices; reusing exhausted enzymatic solution; using a lumen brush that is too small; skipping inspection after cleaning. Cleaning verification — confirming soil was actually removed — is part of the job, not an optional extra.

Water quality is an underappreciated variable in manual cleaning. Hard water rich in calcium and magnesium leaves mineral spots and scale and can reduce detergent performance, while water with high chloride content contributes to pitting and corrosion. ANSI/AAMI ST108 defines water categories for each processing step, with the final rinse requiring high-purity (critical) water to avoid leaving residue and to protect the instruments. A technician who understands that the chemistry of the water itself, not just the detergent, affects the outcome will troubleshoot staining and spotting far more effectively.

Finally, never use abrasive pads, steel wool, or scouring powders on stainless steel instruments — they scratch the protective passivation layer, exposing the metal beneath and inviting rust and pitting that shorten the instrument's working life.

Test Your Knowledge

Why should cool or lukewarm water be used for the initial rinse of blood-contaminated instruments?

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B
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D
Test Your Knowledge

When manually scrubbing instruments, they should be:

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B
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D
Test Your Knowledge

An enzymatic detergent solution loses cleaning power if the water is too hot because excessive heat:

A
B
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D