8.1 Glycogen & Epithelial Mucins: PAS & Diastase Digestion

Key Takeaways

  • The Periodic Acid-Schiff (PAS) reaction relies on 0.5% to 1.0% periodic acid oxidation of vicinal diols (1,2-glycols) into dialdehydes, followed by covalent reaction with colorless leucofuchsin Schiff reagent to restore a stable, insoluble magenta quinoid chromophore.
  • Periodic acid is uniquely self-limiting: it selectively cleaves carbon-carbon bonds between adjacent hydroxyl groups to form dialdehydes without over-oxidizing them into carboxylic acids, preserving maximum reactive aldehyde density for Schiff coupling.
  • Diastase enzymatic digestion differentiates glycogen from diastase-resistant glycoproteins: alpha-amylase hydrolyzes internal alpha-1,4-glucosidic bonds into soluble maltose/glucose, while beta-amylase cannot bypass alpha-1,6 branch points, leaving an insoluble limit dextrin that yields false-positive residual staining.
  • Malt diastase is a crude barley extract containing both alpha- and beta-amylase; unrefined preparations risk protease contamination that can digest tissue proteins and detach sections from slides, requiring strict incubation control at 37°C in pH 6.0 phosphate buffer.
  • Mayer mucicarmine utilizes an aluminum-carminic acid coordination lake ([Carmine-Al]n+) to electrostatically bind epithelial acid mucins and Cryptococcus neoformans capsules, staining them deep rose-red against a metanil yellow counterstain.
Last updated: September 2026

8.1 Glycogen & Epithelial Mucins: PAS & Diastase Digestion

Quick Summary: The Periodic Acid-Schiff (PAS) reaction is one of the most versatile and fundamental histochemical techniques in the pathology laboratory. It relies on the two-step selective oxidation of vicinal 1,2-glycols by periodic acid into dialdehydes, followed by covalent reaction with colorless Schiff leucofuchsin to yield an insoluble magenta quinoid dye-tissue complex. When paired with enzymatic digestion, the PAS with diastase (PAS-D) protocol differentiates diastase-labile glycogen from diastase-resistant glycoproteins (mucins, basement membranes, fungi, and alpha-1 antitrypsin globules). Understanding the enzymatic cleavage kinetics of endoamylases ($\alpha$-amylase) versus exoamylases ($\beta$-amylase) is critical for preventing diagnostic errors. Epithelial mucins can be further evaluated using Mayer mucicarmine, which utilizes an aluminum-carmine basic chelate lake to stain epithelial acid mucins and the cryptococcal capsule rose-red.


1. Carbohydrate Classification in Diagnostic Histology

In diagnostic histotechnology, tissue carbohydrates encompass a broad spectrum of biomolecules ranging from simple storage homopolysaccharides to highly complex conjugated polyanionic mucosubstances. Histochemically, carbohydrates are divided into four major functional categories:

1. Simple Polysaccharides (Homoglycans)

  • Glycogen: The primary macromolecular energy reserve in human physiology. It is a highly branched homopolymer of D-glucose joined by $\alpha$-(1$\rightarrow$4)-glucosidic bonds in the linear chains and $\alpha$-(1$\rightarrow$6)-glucosidic bonds at branch points occurring every 8 to 12 residues.
  • Tissue Distribution: Abundantly stored in hepatocytes, skeletal muscle fibers, cardiac myocytes, the parathyroid gland, hair follicle outer root sheaths, cervical and vaginal non-keratinizing squamous epithelium, and neutrophils.
  • Staining Profile: Strongly PAS positive and completely diastase labile (digested away by $\alpha$-amylase).

2. Neutral Mucosubstances (Neutral Glycoproteins)

  • Biochemical Nature: Contain hexosamines (N-acetylglucosamine, N-acetylgalactosamine) and neutral hexoses (galactose, mannose, fucose) attached to protein cores, but lack free acidic carboxyl ($-COOH$) or sulfate ($-SO_3H$) radicals.
  • Tissue Distribution: Surface foveolar epithelium of the stomach, gastric mucous neck cells, Brunner glands of the duodenum, prostatic epithelium, and seminal vesicles.
  • Staining Profile: Strongly PAS positive, completely diastase resistant, and Alcian blue negative (at all pH levels) due to the complete absence of anionic functional groups.

3. Acid Mucosubstances (Acid Mucins & Proteoglycans)

  • Biochemical Nature: Polyanionic macromolecules containing terminal carboxyl groups (e.g., sialic acid / neuraminic acid, glucuronic acid) or ester sulfate groups ($-O-SO_3^-$) linked to carbohydrate residues.
  • Tissue Distribution: Intestinal goblet cells, bronchial glands, cartilage extracellular matrix, and loose connective tissue stroma.
  • Staining Profile: Strongly Alcian blue positive (at pH 2.5 or pH 1.0) and typically PAS negative or weakly variable (unless rich in available vicinal diols).

4. Complex Glycoproteins (Structural & Diagnostic)

  • Biochemical Nature: Polypeptides covalently linked to branched heterooligosaccharide chains terminating in sialic acid, mannose, or galactose.
  • Tissue Distribution & Entities: Epithelial basement membranes (composed of type IV collagen, laminin, and entactin), thyroid colloid, arterial elastic laminae, fungal wall polysaccharides (chitin, $\beta$-glucans, and mannans), and aggregated $\alpha_1$-antitrypsin globules.
  • Staining Profile: Strongly PAS positive and completely diastase resistant.

2. Periodic Acid-Schiff (PAS) Chemical Reaction Mechanism

The PAS reaction, established histochemically by McManus (1946) and Hotchkiss (1948), is an end-point chemical reaction that demonstrates unmasked aldehyde groups generated from vicinal glycols.

Step 1: Periodic Acid Oxidation (Selective C-C Cleavage)
       OH    OH                                CHO   CHO
        │     │                                 │     │
   ...─ C  ─  C ─...   +   HIO4   ───>   ...─  C     C ─...   +   HIO3  +  H2O
        │     │        (0.5%)                   │     │
        H     H                                 H     H
   [1,2-Vicinal Diol]                     [Dialdehyde Intermediate]
                                          (Stops at aldehyde; NO COOH!)

Step 2: Schiff Leucofuchsin Coupling & Quinoid Chromophore Restoration
   [Dialdehyde]  +  [Colorless Leucofuchsin]  ───>  [Dialdehyde-Leuco Intermediate]
                                                              │
                                                 Running Lukewarm Water Rinse
                                                 (Removes SO2; Restores Quinoid Ring)
                                                              ▼
                                            [Stable Magenta Quinoid Complex]
                                            (Insoluble Alkylsulfonic Acid Lake)

Step 1: Periodic Acid Oxidation

Periodic acid ($HIO_4$, typically supplied as a $0.5%$ to $1.0%$ aqueous solution) acts as a highly selective oxidizing agent. It targets 1,2-glycol (vicinal diol) groups ($-CHOH-CHOH-$) located on adjacent carbon atoms of hexose and pentose sugar rings, as well as 1,2-amino alcohol groups ($-CHOH-CHNH_2-$) and $\alpha$-hydroxy ketones:

\text{R} - \text{CH} - \text{OH} \\ \quad\quad\ \mid \\ \text{R}' - \text{CH} - \text{OH} \end{matrix} \ + \ HIO_4 \ \longrightarrow \ \begin{matrix} \text{R} - \text{CHO} \\ \quad\quad \\ \text{R}' - \text{CHO} \end{matrix} \ + \ HIO_3 \ + \ H_2O$$ * **C-C Bond Cleavage:** Periodic acid selectively cleaves the covalent carbon-carbon bond between carbons carrying adjacent hydroxyl groups, converting each secondary alcohol into a reactive **dialdehyde** ($-CHO$). * **Oxidation Stoichiometry:** The critical advantage of periodic acid over stronger chemical oxidizers (such as chromic acid or potassium permanganate) is that **oxidation ceases at the dialdehyde stage**. Periodic acid does not over-oxidize aldehydes into carboxylic acids ($-COOH$). Because carboxylic acids cannot react with Schiff reagent, this self-limiting oxidation preserves maximum aldehyde density for chromogen coupling. ### Step 2: Schiff Reagent Coupling (Leucofuchsin Reaction) * **Schiff Reagent Synthesis:** Schiff reagent is prepared by treating **basic fuchsin** (a triphenylmethane dye mixture of pararosaniline, rosaniline, and magenta II, with **pararosaniline hydrochloride** being the optimal pure constituent) with sulfurous acid ($H_2SO_3$). Sulfurous acid is generated in situ by combining **sodium metabisulfite ($Na_2S_2O_5$)** and **hydrochloric acid ($HCl$)**, or by bubbling gaseous sulfur dioxide ($SO_2$) through the solution. * **Leucofuchsin Formation:** Sulfurous acid attacks the central carbon of pararosaniline and sulfonates the amino groups, disrupting the conjugated quinoid chromophore. This reduction converts the brilliant dark-red basic fuchsin into a completely **colorless, sulfurated compound: leucofuchsin** (bis-N-aminosulfinic acid of pararosaniline): $$\text{Pararosaniline (Colored Quinoid Dye)} \ + \ 2\,H_2SO_3 \ \longrightarrow \ \text{Leucofuchsin (Colorless Leuco Base)}$$ * **Aldehyde Addition:** When the tissue section containing dialdehydes is immersed in Schiff reagent, two aldehyde molecules react with the amino-sulfinic acid groups of leucofuchsin, forming an unstable intermediate dialdehyde-leucofuchsin complex. * **Chromophore Restoration:** Subsequent rinsing in running lukewarm tap water removes sulfurous acid, triggering molecular rearrangement that restores the planar conjugated **quinoid chromophore**. The resulting alkylsulfonic acid-tissue complex is chemically bound, completely insoluble, and displays an intense, brilliant **magenta/purple** color. * **Sulfite Rinses (Metabisulfite Washes):** Following Schiff incubation, optional rinses in dilute sodium metabisulfite ($0.5\%$) with dilute $HCl$ prevent non-specific re-oxidation of residual, unreacted Schiff reagent by dissolved atmospheric oxygen or tap water minerals, which could otherwise deposit false-positive pink background staining. --- ## 3. Quality Control and Storage of Schiff Reagent Schiff reagent is chemically labile and highly sensitive to light, heat, and atmospheric oxidation. Histotechnology laboratories must maintain rigorous quality assurance protocols: ### 1. Visual Physical Inspection * Fresh, viable Schiff reagent must be **completely clear and colorless** or exhibit a very faint, pale straw tinge. * If the reagent displays any perceptible **pink or red discoloration**, it has undergone auto-oxidation (re-formation of the quinoid chromophore due to sulfur dioxide off-gassing). Discolored reagent causes heavy non-specific background staining and **must be discarded immediately**. ### 2. Formalin Test-Tube QC Assay * Prior to clinical diagnostic run approval, the activity and sensitivity of Schiff reagent must be validated: 1. Pipette $2.0\text{ mL}$ of Schiff reagent into a clean glass test tube. 2. Add a few drops ($2\text{--}3\text{ drops}$) of **$10\%$ neutral buffered formalin** (or $37\%\text{--}40\%$ formaldehyde). 3. **Acceptance Criterion:** The solution must flash **immediately to a deep, dark reddish-purple or magenta** color within seconds. 4. **Rejection Criterion:** If the color develops slowly, appears delayed, or turns only pale pink, the reagent has lost sensitivity and must be discarded. ### 3. Storage and Handling Standards * Schiff reagent must be stored in an airtight, **amber glass bottle at $4^\circ\text{C}$ (refrigerated)** to retard thermal breakdown and photo-oxidation. * During reagent manufacturing, **activated charcoal ($1\text{ to }2\text{ g per }500\text{ mL}$)** is added to adsorb colored impurities and residual unreacted basic fuchsin, followed by filtration through high-density paper. * Bring the working aliquot to room temperature before staining, as cold Schiff reagent exhibits sluggish reaction kinetics. --- ## 4. Glycogen Digestion Enzymes: Malt Diastase vs. Salivary Alpha-Amylase vs. Beta-Amylase Because many tissue structures (mucins, basement membranes, fungi, and glycoproteins) are PAS positive, periodic acid oxidation alone cannot confirm the specific presence of glycogen. To unequivocally identify glycogen, a **paired-slide enzymatic digestion** is performed. Understanding the enzymatic cleavage kinetics of amylases is an essential ASCP HTL examination objective: ``` GLYCOGEN DIGESTION ENZYME COMPARISON: 1. α-Amylase (Endoamylase - Porcine Pancreas or Salivary): Linear Chain: ─G─G─G─G─G─G─G─G─ ──> Hydrolyzes INTERNAL α-(1->4) bonds randomly Result: Rapid cleavage into soluble maltose & glucose -> 100% Glycogen Digested (PAS-D Negative) 2. β-Amylase (Exoamylase - Plant Seeds): Linear Chain: [Non-reducing end] G─G ──> Cleaves maltose units from outer ends only Branch Point: ─G─G─(α-1->6)─G─G─ ──> CANNOT bypass branch points; stops 2–3 units away Result: Leaves massive insoluble LIMIT DEXTRIN (~40–45% of molecule) -> False-Positive PAS Retained! 3. Malt Diastase (Crude Barley Malt Extract): Mixture of α- and β-amylases; effective digestion but risks PROTEASE CONTAMINATION Protease artifact: Digests collagen/gelatin adhesives -> Section lifts or detaches from slide! ``` ### 1. Alpha-Amylase ($\alpha$-Amylase / Endoamylase) * **Mode of Action:** $\alpha$-Amylase is an **endoglycosidase** that cleaves internal **$\alpha$-(1$\rightarrow$4)-glucosidic linkages** randomly throughout the interior of the glycogen molecule. * **Cleavage Kinetics:** It bypasses outer steric hindrance and breaks down the massive, highly branched polymer into tiny, water-soluble disaccharides (**maltose**) and monosaccharides (**glucose**). These cleaved sugar fragments dissolve instantly in the aqueous buffer and wash completely out of the tissue section during rinsing. * **Diagnostic Efficacy:** Produces complete, rapid glycogen elimination within 15 to 30 minutes at $37^\circ\text{C}$. * **Sources & Considerations:** Purified commercial $\alpha$-amylase is isolated from porcine pancreas. Human saliva is rich in $\alpha$-amylase (ptyalin) and was historically used by spitting on slides; however, salivary digestion is strictly forbidden in modern accredited laboratories due to **biohazard safety regulations (transmission of viral hepatitis, HIV, tuberculosis)**, variable enzyme concentration, and the presence of contaminating salivary mucins that can adhere to the slide. ### 2. Beta-Amylase ($\beta$-Amylase / Exoamylase) * **Mode of Action:** $\beta$-Amylase is an **exoglycosidase** (found predominantly in sweet potatoes and barley seeds) that cleaves maltose disaccharides exclusively from the non-reducing outer terminals of polysaccharide chains. * **The Critical Enzymatic Barrier:** $\beta$-Amylase **cannot cleave or bypass $\alpha$-(1$\rightarrow$6)-glucosidic branch points**! Its activity arrests completely 2 to 3 glucose residues before reaching every branch point. * **The Limit Dextrin Artifact:** As a consequence of this enzymatic arrest, $\beta$-amylase leaves a massive, highly branched residual core macromolecule known as **$\beta$-limit dextrin** (representing approximately $40\%\text{ to }45\%$ of the original glycogen mass). Because limit dextrin remains trapped within the tissue and contains abundant vicinal diols, it oxidizes with periodic acid and reacts with Schiff reagent, **yielding persistent magenta staining**! On the HTL examination, substituting pure $\beta$-amylase for $\alpha$-amylase will cause an erroneous interpretation of "diastase resistance." ### 3. Malt Diastase (Barley Malt Extract) * **Biochemical Nature:** A crude commercial extract derived from malted barley containing a natural mixture of both $\alpha$-amylase and $\beta$-amylase. * **Efficacy:** Because it contains active $\alpha$-amylase, malt diastase successfully hydrolyzes glycogen completely to soluble subunits. * **The Protease Contamination Pitfall:** Crude commercial preparations of malt diastase frequently contain contaminating proteolytic enzymes (peptidases and proteases). If the digestion buffer is unbuffered, if incubation is prolonged ($>1\text{ hour}$), or if the incubation temperature exceeds $37^\circ\text{C}$, these contaminating proteases will digest tissue collagen fibers and proteolytic adhesives (such as gelatin or poly-L-lysine), **causing the tissue section to detach, roll up, or completely wash off the glass slide**! To prevent section loss, laboratories must utilize positively charged plus slides and maintain the digestion bath in phosphate buffer at $pH\ 6.0$ at $37^\circ\text{C}$ for no longer than 30 to 60 minutes. --- ## 5. Paired Slide Technique and Diagnostic Interpretation Matrix To establish an unequivocal histochemical diagnosis, two consecutive serial sections are processed concurrently: 1. **Slide 1 (PAS without Diastase / Untreated Control):** Incubated in distilled water or buffer alone at $37^\circ\text{C}$ for 30 minutes, then stained by the standard PAS protocol. 2. **Slide 2 (PAS with Diastase / Digested):** Incubated in working $\alpha$-amylase or malt diastase solution at $37^\circ\text{C}$ for 30 to 60 minutes, rinsed thoroughly in running water to wash out cleaved sugars, and then stained by the standard PAS protocol. | Tissue Component / Pathologic Entity | Untreated Slide (PAS Alone) | Digested Slide (PAS with Diastase) | Diagnostic Classification | Clinical Significance | | :--- | :--- | :--- | :--- | :--- | | **Hepatocyte Glycogen** | Intense Magenta ($3+$ to $4+$) | Completely Negative / Clear ($0$) | **Diastase Labile** | Normal metabolic liver storage; depleted in prolonged fasting | | **Von Gierke Disease (Type I GSD)** | Massive Sheet-like Magenta ($4+$) | Completely Negative / Clear ($0$) | **Diastase Labile** | Glucose-6-phosphatase deficiency; hepatic glycogen accumulation | | **Pompe Disease (Type II GSD)** | Coarse Granular Magenta ($4+$) | Completely Negative / Clear ($0$) | **Diastase Labile** | Lysosomal acid $\alpha$-glucosidase deficiency; cardiac/skeletal myopathy | | **$\alpha_1$-Antitrypsin Globules** | Bright Magenta Globules ($3+$) | **Intense Magenta Globules ($3+$)** | **Diastase Resistant** | Periportal hepatocyte retention of misfolded mutant Z-protein | | **Epithelial Mucins (Goblet Cells)** | Deep Magenta ($3+$ to $4+$) | Deep Magenta ($3+$ to $4+$) | **Diastase Resistant** | Sialo/sulfomucins lack $\alpha$-(1$\rightarrow$4) bonds; retain PAS positivity | | **Basement Membranes (GBM, TBM)** | Sharp Linear Magenta ($3+$) | Sharp Linear Magenta ($3+$) | **Diastase Resistant** | Collagen type IV and laminin glycoproteins remain intact | | **Fungal Walls (*Candida*, *Aspergillus*)** | Brilliant Magenta ($4+$) | Brilliant Magenta ($4+$) | **Diastase Resistant** | Fungal wall chitin and $\beta$-glucans are impervious to $\alpha$-amylase | | **Ewing Sarcoma / PNET** | Patchy Cytoplasmic Magenta ($3+$) | Completely Negative / Clear ($0$) | **Diastase Labile** | Glycogen-rich small round blue cell tumor of bone/soft tissue | | **Renal Clear Cell Carcinoma** | Clear Cytoplasm, Focal Magenta | Negative / Clear ($0$) | **Diastase Labile** | Abundant cytoplasmic glycogen washed out in processing leaves vacuoles | --- ## 6. High-Yield Diagnostic Applications on the HTL Exam ### 1. Alpha-1 Antitrypsin ($\alpha_1$-AT) Deficiency * **Pathophysiology:** A genetic mutation (commonly the PiZZ homozygous genotype) causes misfolding of the $\alpha_1$-antitrypsin glycoprotein in the endoplasmic reticulum of hepatocytes. Because the abnormal protein cannot undergo normal secretory processing, it polymerizes into insoluble spherical aggregates. * **Histochemical Hallmark:** Under light microscopy, the unsecreted mutant protein forms round, refractile, eosinophilic **periportal cytoplasmic globules ($1\text{ to }40\ \mu\text{m}$)**. Because these globules are complex glycoproteins rather than glycogen, they are **PAS positive and diastase resistant (PAS-D positive)**, shining as brilliant magenta spheres against a pale, digested hepatocyte background. ### 2. Ewing Sarcoma vs. Other Small Round Blue Cell Tumors * Ewing sarcoma / Primitive Neuroectodermal Tumor (PNET) cells contain substantial amounts of stored cytoplasmic glycogen. On cytology and histology, tumor cells demonstrate intense **PAS positivity that is completely abolished by diastase (diastase labile)**. * This distinguishes Ewing sarcoma from neuroblastoma (glycogen negative), lymphoblastic lymphoma (glycogen negative), and rhabdomyosarcoma (variable). ### 3. Renal Cell Carcinoma Subtyping * **Clear Cell RCC:** Tumor cells possess abundant cytoplasmic lipid and glycogen. Routine paraffin processing extracts lipids, leaving clear optical vacuoles, while residual glycogen stains **PAS positive and diastase labile**. * **Chromophobe RCC:** Lacks significant glycogen; instead contains numerous microvesicles that stain strongly with Hale colloidal iron. --- ## 7. Mayer Mucicarmine Stain While the PAS reaction demonstrates a vast array of neutral and acidic glycoproteins, **Mayer mucicarmine** is an empirical, highly specific stain designed exclusively to demonstrate **epithelial acid mucosubstances**. ### 1. Formulation & Staining Chemistry * **Carmine:** A natural hydroxyanthraquinone dye (carminic acid) extracted from dried female cochineal insects (*Dactylopius coccus*). * **Mordant Mechanism:** Carminic acid has little affinity for tissue mucins on its own. **Aluminum chloride ($AlCl_3$)** is incorporated into the solution as an inorganic Lewis acid mordant. Aluminum cations coordinate with carminic acid to synthesize an organometallic coordination complex: a **cationic aluminum-carmine lake ($[Carmine-Al]^{n+}$)**. * **Electrostatic Specificity:** The positively charged aluminum-carmine lake binds electrostatically to negatively charged polyanionic groups (carboxyl and sulfate) present on **epithelial mucins**. It **does not stain connective tissue mucins** (such as hyaluronic acid or chondroitin sulfate), providing a sharp distinction between epithelial and mesenchymal secretions. ### 2. Staining Sequence & Results 1. **Nuclear Stain:** Weigert iron hematoxylin (resists decolorization by the acidic mucicarmine solution). Stains nuclei black. 2. **Mucin Stain:** Mayer mucicarmine working solution ($AlCl_3 + \text{carmine} + \text{ethanol}$). Stains epithelial mucin **deep rose-red**. 3. **Counterstain:** Metanil yellow (or tartrazine). Imparts a bright **yellow** color to cytoplasmic background and collagen fibers, providing stark optical contrast against the rose-red mucin droplets. ### 3. Major Diagnostic Uses * **Adenocarcinomas:** Confirms epithelial mucin production in poorly differentiated gastric, colonic, breast, and pulmonary carcinomas, separating metastatic adenocarcinoma (mucicarmine positive) from squamous cell carcinoma, mesothelioma, or lymphoma. * **Cryptococcus neoformans:** *C. neoformans* is a pathogenic encapsulated budding yeast. Its thick polysaccharide capsule is rich in acidic glucuronoxylomannan, which is intensely **carminophilic (stains brilliant rose-red)**. Mucicarmine is the diagnostic gold standard for differentiating *Cryptococcus* from morphologically similar non-carminophilic fungi such as *Histoplasma capsulatum* or *Blastomyces dermatitidis*.
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Periodic Acid-Schiff Chemical Mechanism and Amylase Digestion Pathways
Test Your Knowledge

Regarding the chemical reaction mechanism of the Periodic Acid-Schiff (PAS) stain, what is the precise stoichiometric role of periodic acid, and why is it preferred over stronger oxidizing agents?

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Test Your Knowledge

A histotechnology student attempts to perform a PAS with diastase digestion on a liver biopsy suspected of containing excess glycogen. Instead of using certified malt diastase or alpha-amylase, the student uses an unverified enzyme extract composed exclusively of pure beta-amylase. What staining outcome will be observed on the digested slide, and what is the underlying biochemical explanation?

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Test Your Knowledge

A histotechnologist evaluates a paired PAS and PAS with diastase (PAS-D) stain on a liver biopsy from a 42-year-old patient presenting with cirrhosis and pulmonary emphysema. Microscopic examination reveals that normal hepatocyte cytoplasmic magenta staining is completely eliminated on the digested slide; however, prominent, spherical periportal cytoplasmic droplets (1 to 20 micrometers) remain intensely magenta on both slides. How should these findings be interpreted?

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