18.1 Chromosomal & Genetic Abnormalities

Key Takeaways

  • Trisomy 21 soft markers include nuchal translucency >= 3 mm, a second-trimester nuchal fold >= 6 mm, absent or hypoplastic nasal bone, echogenic bowel, echogenic intracardiac focus, short femur and humerus, and mild ventriculomegaly
  • Trisomy 18 classically shows clenched hands with overlapping digits, rocker-bottom feet, choroid plexus cysts, a strawberry-shaped head, omphalocele, early intrauterine growth restriction, and a single umbilical artery
  • Trisomy 13 is suggested by holoprosencephaly, midline facial clefts, and postaxial polydactyly, while triploidy produces severe asymmetric growth restriction, third-fourth digit syndactyly, and partial molar placental changes
  • Turner syndrome (45,X) presents with a large septated cystic hygroma and non-immune hydrops and is frequently lethal in utero
  • Soft markers only modify aneuploidy risk through likelihood ratios, whereas structural anomalies such as omphalocele or holoprosencephaly warrant an offer of diagnostic testing by chorionic villus sampling or amniocentesis
Last updated: July 2026

Aneuploidy is an abnormal chromosome number, and most clinically recognized aneuploidies are trisomies — three copies of a chromosome instead of two. Second- and third-trimester sonography does not diagnose aneuploidy, but recognizable constellations of findings raise or lower the a priori risk and guide the offer of diagnostic testing.

Trisomy 21 (Down Syndrome)

Trisomy 21 is the most common autosomal trisomy in live-born infants, and its prevalence rises steeply with maternal age. Because roughly half of affected fetuses have no major structural defect, detection leans heavily on soft markers:

  • Nuchal translucency (NT) >= 3 mm (or above the 95th percentile) at 11-14 weeks
  • Nuchal fold >= 6 mm measured in the second trimester at the level of the cerebellum
  • Absent or hypoplastic nasal bone on the midsagittal facial profile
  • Echogenic bowel — bowel as bright as adjacent bone
  • Echogenic intracardiac focus (EIF) — a bright dot in a cardiac ventricle, usually the left
  • Short femur and short humerus relative to the biparietal diameter
  • Mild ventriculomegaly (atrial diameter 10-12 mm) and renal pyelectasis

Structural associations include duodenal atresia (the double-bubble sign, present in about 30% of fetuses with trisomy 21) and atrioventricular septal (endocardial cushion) defects.

Trisomy 18 (Edwards Syndrome)

Trisomy 18 produces a long list of findings, and most fetuses show multiple anomalies plus early, symmetric intrauterine growth restriction (IUGR):

  • Clenched hands with overlapping digits — the index finger overrides the third and the fifth overrides the fourth, and the hands rarely open
  • Rocker-bottom feet with a prominent heel
  • Choroid plexus cysts (also seen in normal fetuses, but persistent or multiple cysts in combination with other findings raise concern)
  • Strawberry-shaped head — flattening of the occiput with frontal narrowing in the transverse axial view
  • Omphalocele, congenital heart defects, and a single umbilical artery (SUA)

Trisomy 13 (Patau Syndrome)

Trisomy 13 is dominated by midline defects: holoprosencephaly (failure of forebrain cleavage), midline facial clefts with hypotelorism or a proboscis, and postaxial polydactyly. Echogenic, enlarged kidneys and cardiac defects are common.

Triploidy and Turner Syndrome

Triploidy (a 69,XXY or similar karyotype, usually from a double sperm contribution) causes severe, early asymmetric IUGR with marked head-to-body disproportion, syndactyly of the third and fourth digits, and partial molar changes in a large, cystic placenta when the extra set is paternal.

Turner syndrome (45,X) presents with a large, septated cystic hygroma in the posterior neck — often the largest neck mass seen in obstetric sonography — plus generalized non-immune hydrops. Associated findings include coarctation of the aorta and horseshoe kidney, and massive hygromas are usually lethal in utero.

ConditionHallmark sonographic findings
Trisomy 21Increased NT/nuchal fold, absent nasal bone, echogenic bowel, EIF, short femur/humerus
Trisomy 18Clenched hands, rocker-bottom feet, choroid plexus cysts, strawberry head, omphalocele, SUA
Trisomy 13Holoprosencephaly, midline cleft, polydactyly
TriploidyAsymmetric IUGR, syndactyly, partial mole
Turner (45,X)Septated cystic hygroma, hydrops

Soft Markers Versus Structural Findings

A soft marker is a minor, often transient finding that is common in normal fetuses but statistically over-represented in aneuploidy. Soft markers — EIF, echogenic bowel, short femur, pyelectasis, choroid plexus cysts, thickened nuchal fold, absent nasal bone — do not damage the fetus; they only modify risk, each carrying a likelihood ratio that is multiplied into the patient's age- and serum-screen-based risk. An isolated soft marker in a low-risk patient usually requires no invasive testing. A structural anomaly is different: an omphalocele, holoprosencephaly, or major cardiac defect is itself abnormal and carries a substantial aneuploidy association, so counseling should include an offer of diagnostic testingchorionic villus sampling (CVS) in the first trimester or amniocentesis after 15 weeks — with karyotype and chromosomal microarray.

Genetic (Non-Aneuploid) Conditions

Polycystic Kidney Disease

  • Autosomal recessive polycystic kidney disease (ARPKD), also called infantile polycystic disease, produces bilaterally enlarged, diffusely echogenic kidneys from innumerable microscopic cysts, usually with oligohydramnios from poor urine output; severe cases progress to the Potter sequence with pulmonary hypoplasia.
  • Autosomal dominant polycystic kidney disease (ADPKD) typically presents in adulthood, so the fetal kidneys often look normal; when visible prenatally, they are enlarged and echogenic but amniotic fluid usually remains normal because enough function is preserved. A family history is the key clue.

Skeletal Dysplasias

Skeletal dysplasias are evaluated with long-bone biometry — femur and humerus lengths plotted against gestational age — plus the chest circumference, because a small thorax predicts lethal pulmonary hypoplasia.

  • Thanatophoric dysplasia is the most common lethal skeletal dysplasia: severe micromelia (all limb segments shortened), a narrow, bell-shaped thorax, platyspondyly (flattened vertebrae), bowed telephone-receiver femurs, and sometimes a cloverleaf skull.
  • Achondroplasia is autosomal dominant (FGFR3 gene) and non-lethal: rhizomelic shortening (proximal segment, so the humerus and femur are shortest), frontal bossing, and a normal trunk length. Heterozygous cases may not show short limbs until the late second trimester.
  • Osteogenesis imperfecta type II is the lethal perinatal form: multiple in utero fractures, bowed and angulated limbs, beaded ribs, and strikingly decreased skull mineralization, so the brain is seen unusually well and the skull compresses under transducer pressure.
DysplasiaInheritanceKey featuresPrognosis
ThanatophoricAD (new mutation)Micromelia, narrow chest, cloverleaf skullLethal
AchondroplasiaADRhizomelia, frontal bossing, normal trunkNon-lethal
Osteogenesis imperfecta IIAD/ARFractures, bowing, poor skull ossificationLethal
Test Your Knowledge

A second-trimester fetus demonstrates clenched hands with overlapping digits, rocker-bottom feet, a strawberry-shaped head, and a single umbilical artery. Which karyotype is most likely?

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D
Test Your Knowledge

Which finding is considered a soft marker rather than a structural anomaly when counseling a patient about aneuploidy risk?

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B
C
D
Test Your Knowledge

A fetus has severe micromelia, a narrow bell-shaped thorax, flattened vertebral bodies, and a cloverleaf skull. What is the most likely diagnosis, and why is the chest measurement critical?

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B
C
D