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Acute CNS Infections, Encephalitis & Inflammatory Emergencies

Key Takeaways

  • Suspected bacterial meningitis requires prompt empiric antimicrobials; imaging or an unsafe/delayed LP must not postpone necessary treatment.

  • Listeria risk changes empiric coverage, and healthcare-associated CNS infection requires a different resistance-aware regimen.

  • For suspected HSV encephalitis, start acyclovir promptly with renal and hydration precautions; repeat an early negative PCR when suspicion remains high.

  • Autoimmune encephalitis, PRES, RCVS, infection, and toxic-metabolic disease overlap clinically and require phenotype-based investigation.

  • PRES can coexist with infarction or hemorrhage; avoid glucocorticoids as RCVS treatment and do not promise that calcium-channel blockers prevent its strokes.

Last updated: October 2026

Acute CNS Infections, Encephalitis & Inflammatory Emergencies

Acute infectious, inflammatory, and neurovascular encephalopathies are life-threatening neurological catastrophes frequently admitted to the neurocritical care unit. Rapid recognition, diagnostic lumbar puncture (LPLP), tailored neuroimaging, and emergent pathogen-directed or immunosuppressive therapy are essential to prevent irreversible neurological disability and death.


Acute Bacterial Meningitis

Acute bacterial meningitis is an inflammatory infection of the arachnoid membrane, subarachnoid space, and cerebrospinal fluid (CSFCSF). Rapid bacterial proliferation and autolysis trigger massive release of cell wall components (peptidoglycan, teichoic acid, lipopolysaccharide), eliciting subarachnoid cytokine cascades (IL-1IL\text{-}1, TNF-αTNF\text{-}\alpha) that induce blood-brain barrier breakdown, purulent exudate accumulation, cerebral vasculitis, raised intracranial pressure, and secondary brain herniation.

Pathogen Stratification by Clinical Setting

  • Community-Acquired Adults (18–50 years18\text{--}50\text{ years}): Streptococcus pneumoniae (50%–60%50\%\text{--}60\%), Neisseria meningitidis (20%–30%20\%\text{--}30\%).
  • Older Adults (>50 years> 50\text{ years}), Immunocompromised, Alcoholism, Cirrhosis, Pregnancy: Streptococcus pneumoniae, Neisseria meningitidis, and Listeria monocytogenesListeria\ monocytogenes (10%–15%10\%\text{--}15\%).
  • Post-Neurosurgical, External Ventricular Drains (EVD), Penetrating Head Trauma: Staphylococcus aureus, coagulase-negative staphylococci (Staphylococcus epidermidis), and aerobic Gram-negative bacilli (Pseudomonas aeruginosa, Acinetobacter baumannii, Klebsiella pneumoniae, Enterobacter).

Empiric Antimicrobial Regimens

Clinical SettingCommon PathogensEmpiric Antimicrobial Regimen
Adult 18–50 yearsS. pneumoniae, N. meningitidisCeftriaxone 2 g2\text{ g} IV q12h (or Cefotaxime 2 g2\text{ g} IV q4h) + Vancomycin 15–20 mg/kg15\text{--}20\text{ mg/kg} IV q8–12h (trough 15–20 μg/mL15\text{--}20\text{ }\mu\text{g/mL})
Adult > 50 years, Immunocompromised, PregnantS. pneumoniae, N. meningitidis, L. monocytogenes, Gram-negative bacilliCeftriaxone 2 g2\text{ g} IV q12h + Vancomycin 15–20 mg/kg15\text{--}20\text{ mg/kg} IV q8–12h + Ampicillin 2 g2\text{ g} IV q4h
Post-Neurosurgical / EVD-associatedS. aureus, P. aeruginosa, EnterobacteriaceaeMeropenem 2 g2\text{ g} IV q8h (or Cefepime 2 g2\text{ g} IV q8h) + Vancomycin 15–20 mg/kg15\text{--}20\text{ mg/kg} IV q8–12h

Adjunctive Dexamethasone

  • Landmark Evidence (de Gans & van de Beek, NEJM 2002): In a multicenter randomized trial of 301 adults with acute bacterial meningitis, adjunctive dexamethasone reduced unfavorable outcomes from 25%25\% to 15%15\% (p=0.03p = 0.03) and reduced mortality from 15%15\% to 7%7\% (p=0.04p = 0.04), with the most profound mortality reduction in Streptococcus pneumoniaeStreptococcus\ pneumoniae meningitis (34% to 14%34\%\text{ to }14\%, p=0.02p = 0.02).
  • Dosing & Administration: 10 mg10\text{ mg} IV administered prior to or concurrently with the first dose of antimicrobial therapy, continued at 10 mg10\text{ mg} IV q6h for 4 days.
  • Clinical Nuances:
    • If the pathogen is proven to be Streptococcus pneumoniae, complete the full 4-day dexamethasone course.
    • If another pathogen (N. meningitidis, L. monocytogenes, Gram-negative bacilli) or virus is identified, discontinue dexamethasone immediately.
    • If antimicrobial therapy has already been administered for several hours, the expected benefit of delayed steroid initiation is less certain; obtain infection-specific guidance rather than delaying antibiotics.

Diagnostic CSF Profiles in Meningitis & Encephalitis

EtiologyOpening PressureWBC Count (cells/μL\mu\text{L})DifferentialProtein (mg/dL)CSF:Serum Glucose Ratio
Normal100–200 mm H2O100\text{--}200\text{ mm H}_2\text{O}<5< 5>95%> 95\% Lymphocytes15–4515\text{--}45>0.60> 0.60
Bacterial MeningitisMarkedly elevated (>250–350> 250\text{--}350)1,000–10,000+1,000\text{--}10,000+>80%> 80\% NeutrophilsMarkedly high (100–500+100\text{--}500+)Markedly low (<0.40< 0.40, often <0.10< 0.10)
Viral Encephalitis / MeningitisNormal to mildly elevated50–50050\text{--}500>80%> 80\% LymphocytesMildly elevated (50–10050\text{--}100)Normal (>0.60> 0.60)
Fungal / Tuberculous MeningitisModerately elevated (>200–300> 200\text{--}300)100–500100\text{--}500Lymphocytes / MononuclearHigh (100–500100\text{--}500)Low (<0.30< 0.30)
Autoimmune EncephalitisNormal10–10010\text{--}100 (mild)Lymphocytes (or normal)Mildly elevated (50–10050\text{--}100)Normal (>0.60> 0.60)

Important

When acute bacterial meningitis is suspected, never delay antimicrobial administration for head CT or lumbar puncture. If a CT scan is required prior to LP (due to altered mental status, focal neurological deficits, new seizures, or papilledema), obtain blood cultures, administer IV dexamethasone 10 mg10\text{ mg} and empiric antibiotics immediately, and then transport the patient to CT.


Viral Encephalitis: HSV-1 and Neurotropic Viruses

Herpes Simplex Virus Encephalitis (HSV-1)

HSV-1 is the most common cause of non-epidemic sporadic viral encephalitis in developed nations, carrying >70%> 70\% mortality if untreated:

  • Pathophysiology: Retrograde axonal transport via olfactory tract or trigeminal sensory axons into limbic structures, producing asymmetric necrotizing, hemorrhagic encephalitis with marked predilection for the medial temporal lobes, insula, and inferior frontal lobes.
  • Clinical Presentation: Acute/subacute onset of fever, headache, altered mental status, bizarre behavioral changes, personality disintegration, olfactory/gustatory hallucinations, memory loss, and focal temporal lobe seizures with impaired awareness.
  • Diagnostic Hallmarks:
    • Brain MRI: Asymmetric hyperintensity on T2/FLAIR and restricted diffusion on DWI in the medial temporal lobes, uncus, amygdala, and insular cortex. Petechial gyral hemorrhage may be evident on gradient-recalled echo (GREGRE) or susceptibility-weighted imaging (SWISWI).
    • cEEG: Lateralized Periodic Discharges (LPDsLPDs) recurring every 1–2 seconds1\text{--}2\text{ seconds} over the affected temporal lobe.
    • CSF Analysis: Lymphocytic pleocytosis (50–500 cells/μL50\text{--}500\text{ cells/}\mu\text{L}), elevated protein, elevated red blood cells (RBCsRBCs), and normal glucose. CSF HSV-1 PCR exhibits >95%> 95\% sensitivity and specificity. If early PCR (<48 hours< 48\text{ hours}) is negative but clinical suspicion remains elevated, continue acyclovir and repeat LP at 3–7 days3\text{--}7\text{ days}.
  • Empiric Management: Immediate Intravenous Acyclovir (10 mg/kg10\text{ mg/kg} IV q8h with dosing weight, renal adjustment, and infusion plan selected according to the current protocol) for 14–21 days14\text{--}21\text{ days}.
    • Clinical Pitfall: Acyclovir is insoluble in urine and precipitates in renal collecting tubules, causing acute obstructive crystal nephropathy. Infuse acyclovir slowly over at least 1 hour1\text{ hour} with appropriate hydration and renal monitoring while respecting cardiac, lung, and brain fluid constraints.

Other Neurotropic Viral Emergencies

  • Varicella Zoster Virus (VZVVZV): Causes small- and large-vessel cerebral vasculopathy, producing multifocal ischemic and hemorrhagic strokes, aneurysmal dilatation, or temporal arteritis-like presentations. Treat with IV acyclovir when indicated; adjunctive steroids are a specialist, context-dependent decision with limited evidence rather than mandatory pulse treatment.
  • West Nile Virus (WNVWNV): Neuroinvasive disease presents with fever, aseptic meningitis, encephalitis, and acute asymmetric flaccid paralysis caused by viral destruction of anterior horn cells (poliomyelitis-like syndrome). Patients exhibit prominent postural/action tremors, myoclonus, and parkinsonian rigidity. Brain MRI reveals T2/FLAIR hyperintensities in the substantia nigra, basal ganglia, and thalamus.

Distinguish Infectious and Immune Encephalitis

Psychiatric change, memory disturbance, seizures, dyskinesias, autonomic instability, and hypoventilation can indicate autoimmune encephalitis. Anti-NMDA receptor disease targets GluN1; LGI1 disease can produce brief faciobrachial dystonic seizures and hyponatremia; CASPR2 disease may combine encephalitis, neuromyotonia, dysautonomia, and severe insomnia. None of these patterns justifies omitting an infectious or toxic-metabolic evaluation. CSF and serum testing have different sensitivities and false-positive risks; interpret antibodies with the phenotype and appropriate paired testing.

MRI, EEG, CSF, and tumor screening support assessment. A normal MRI or initially mild CSF profile does not exclude immune disease. Tumor association varies with antibody, age, and sex. If a relevant tumor is present, coordinate treatment; removal is important but not a guaranteed immediate cure. First-line immunotherapy and escalation are expert-directed and depend on diagnosis, response, infection risk, and organ function. The dedicated immune-emergencies section develops this reasoning in detail rather than imposing a universal fixed drug sequence.

Reversible Neurovascular Encephalopathies: PRES and RCVS

Posterior Reversible Encephalopathy Syndrome (PRES)

PRES is a clinicoradiological neurovascular syndrome characterized by failed cerebral autoregulation:

  • Pathophysiology: Acute severe blood pressure elevation exceeds the myogenic upper limit of cerebral autoregulation, causing arteriolar hyperperfusion, endothelial shear stress, blood-brain barrier breakdown, and extravasation of plasma and macromolecules into the interstitium (vasogenic edema). Vasogenic edema preferentially targets the parieto-occipital subcortical white matter because the posterior vertebrobasilar circulation possesses significantly less sympathetic adrenergic perivascular innervation compared to the carotid circulation.
  • Etiologies & Triggers: Hypertensive emergency, preeclampsia/eclampsia, calcineurin inhibitors (tacrolimus, cyclosporine in solid organ transplant recipients), cytotoxic chemotherapy, and severe sepsis.
  • Clinical Presentation: Subacute encephalopathy, throbbing headache, generalized seizures (70%–80%70\%\text{--}80\%), visual disturbances (homonymous hemianopia, visual hallucinations, cortical blindness / Anton syndrome).
  • Neuroimaging: Brain MRI demonstrates symmetric hyperintensity on T2/FLAIR in parieto-occipital white matter. Apparent diffusion coefficient (ADCADC) mapping reveals facilitated diffusion (bright on ADC), supporting vasogenic edema; restricted diffusion, infarction, or hemorrhage can coexist and must be assessed.
  • Management:
    • Controlled BP Reduction: Titrate IV labetalol, nicardipine, or clevidipine. Lower MAP by no more than 20%–25%20\%\text{--}25\% within the first 2 hours to prevent secondary cerebral watershed ischemia.
    • Seizure Control & Toxin Withdrawal: Intravenous magnesium sulfate (4–6 g4\text{--}6\text{ g} bolus then 1–2 g/h1\text{--}2\text{ g/h}) for eclampsia; immediately discontinue or reduce doses of calcineurin inhibitors or offending chemotherapeutic agents.

Reversible Cerebral Vasoconstriction Syndrome (RCVS)

RCVS is characterized by transient, reversible dysregulation of cerebral arterial tone:

  • Clinical Hallmark: Recurrent "thunderclap" headaches—sudden, explosive, agonizing headaches reaching maximal 10/1010/10 intensity within seconds ("crashing waves"), recurring multiple times over 1–4 weeks1\text{--}4\text{ weeks}. Often triggered by Valsalva, coughing, exertion, or emotional stress.
  • Triggers: Postpartum state, sympathomimetic and serotonergic vasoactive substances: SSRIs, SNRIs, nasal decongestants (pseudoephedrine), triptans, ergotamines, cocaine, amphetamines, and cannabis.
  • Complications: Non-aneurysmal convexity subarachnoid hemorrhage (cSAHcSAH) (30%–35%30\%\text{--}35\%), ischemic stroke in watershed distributions, and lobar intracerebral hemorrhage.
  • Imaging: CTA, MRA, or catheter DSA reveals diffuse, multifocal, segmental narrowing and ectasia ("string of beads" appearance) affecting medium and large cerebral arteries, which completely resolves on follow-up imaging within 3 months. Catheter angiography may be normal during the first 3–5 days3\text{--}5\text{ days} (delayed vasoconstriction).
  • Therapy: Oral calcium channel blockers (Nimodipine 60 mg60\text{ mg} q4h or Verapamil) to relieve headache in selected patients; prevention of stroke or other complications is not established; strict cessation of all vasoactive medications.

Warning

Avoid glucocorticoids as treatment for RCVS: observational evidence associates them with worsening. Do not confuse RCVS with inflammatory vasculitis. A separate compelling steroid indication requires expert assessment rather than assuming the RCVS label resolves every competing risk.

Test Your Knowledge

A 68-year-old male with a history of alcohol use disorder is brought to the emergency department with fever, severe neck stiffness, and progressive lethargy. A lumbar puncture is performed after head CT excludes mass effect. CSF analysis reveals opening pressure 320 mm H2O, white blood cell count 2,800/µL with 88% neutrophils, protein 240 mg/dL, CSF glucose 22 mg/dL (synchronous blood glucose 110 mg/dL). Gram stain demonstrates Gram-positive bacilli alongside Gram-positive diplococci. Which of the following antimicrobial and adjunctive regimens is the most appropriate immediate therapy?

A

Ceftriaxone monotherapy (2 g IV q12h) plus high-dose dexamethasone (20 mg IV q4h) for 14 days.

B

Vancomycin (15–20 mg/kg IV q12h) plus Meropenem (1 g IV q8h) without corticosteroids.

C

Ampicillin (2 g IV q4h) monotherapy with immediate therapeutic hypothermia to 33°C.

D

Ceftriaxone (2 g IV q12h) plus Vancomycin (15–20 mg/kg IV q8–12h) plus Ampicillin (2 g IV q4h) with Dexamethasone (10 mg IV) administered prior to or with the first antibiotic dose.

Test Your Knowledge

A 22-year-old previously healthy female is transferred to the neuro-ICU. Three weeks ago, she developed flu-like symptoms followed by severe paranoia, visual hallucinations, and acute manic psychosis, leading to an initial psychiatric admission. Over the past 48 hours, she has become mute and catatonic, developed generalized tonic-clonic seizures, and now exhibits continuous, rhythmic, involuntary chewing, lip-smacking, and tongue-protruding movements. Continuous monitoring demonstrates fluctuating heart rates (from 35 bpm to 150 bpm), labile blood pressure, and episodes of central hypoventilation. What is the most likely diagnosis, and what is the critical initial diagnostic evaluation and therapeutic strategy?

A

Suspect anti-NMDA receptor encephalitis; obtain appropriate CSF/serum evaluation, tumor screening, and expert-directed treatment while addressing infectious alternatives.

B

Acute disseminated encephalomyelitis (ADEM); initiate high-dose intravenous acyclovir and broad-spectrum antibiotics.

C

Neuroleptic malignant syndrome; discontinue psychiatric medications and initiate bromocriptine and dantrolene monotherapy.

D

Herpes simplex virus encephalitis; perform emergent stereotactic brain biopsy of the temporal lobe and administer foscarnet.

Test Your Knowledge

A 34-year-old female, 10 days postpartum following an uncomplicated vaginal delivery, presents to the emergency department after experiencing four discrete episodes of excruciating, explosive headaches over the past 48 hours. Each headache reached maximal 10/10 severity within 10 seconds ('crashing waves'), often triggered by coughing or bearing down. Brain MRI demonstrates trace, non-aneurysmal subarachnoid hemorrhage confined to the right high frontoparietal cortical sulci (convexity SAH) without parenchymal hematoma. Catheter cerebral angiography (DSA) reveals diffuse, multifocal, segmental alternating areas of constriction and dilation ('string of beads') affecting multiple second- and third-order branches of the bilateral anterior and middle cerebral arteries. Which of the following therapeutic decisions is most critical for this patient?

A

Administer intravenous methylprednisolone 1 g daily for 5 days under the presumption of primary central nervous system angiitis (PACNS).

B

Evaluate the postpartum RCVS presentation and complications, remove relevant triggers, consider headache therapy, and avoid glucocorticoids as RCVS treatment.

C

Perform emergent endovascular balloon angioplasty of all narrowed segmental cerebral arteries.

D

Initiate full-dose therapeutic anticoagulation with intravenous heparin to prevent venous sinus thrombosis.

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