10.2 KEPI Immunization Schedule & Vaccine Logistics
Key Takeaways
- The Kenya routine immunization schedule gives BCG and OPV 0 at birth; Pentavalent (DTP-HepB-Hib), OPV, PCV-10 and ROTAVAC at 6, 10 and 14 weeks; IPV 1 at 14 weeks; Measles-Rubella 1, IPV 2 and yellow fever (endemic counties) at 9 months; and Measles-Rubella 2 at 18 months.
- Three changes took effect on 1 November 2025: HPV moved from two doses to a single dose at 10 years, IPV moved from one dose to two (14 weeks and 9 months), and the malaria vaccine transitioned from RTS,S/AS01 to R21/Matrix-M with expanded sub-county coverage.
- The malaria vaccine is a 4-dose series at 6, 7, 9 and 24 months given only in designated malaria-endemic sub-counties; the 24-month dose is the one most often missed because it falls outside the routine infant visits.
- Specific routes and sites are standardized: BCG intradermally (0.05 mL, right upper arm); Pentavalent, PCV-10, IPV, HPV and malaria vaccine intramuscularly (0.5 mL, anterolateral thigh or deltoid); Measles-Rubella subcutaneously (0.5 mL, right upper arm); OPV and ROTAVAC orally.
- Cold chain requires a continuous +2°C to +8°C at facility level, with OPV held at -15°C to -25°C only at central and regional bulk depots; freeze-sensitive vaccines (Pentavalent, PCV-10, Td, HPV, HepB, IPV) must never be frozen, and the Shake Test is the protocol for confirming freeze damage before discarding.
KEPI Immunization Schedule & Vaccine Logistics
The Kenya Expanded Programme on Immunization (KEPI), coordinated under the National Vaccines and Immunization Program (NVIP) of the Ministry of Health, is one of Kenya's most cost-effective and impactful public health interventions. Immunization protects infants and young children against major infectious killers: tuberculosis, poliomyelitis, diphtheria, pertussis, tetanus, hepatitis B, Haemophilus influenzae type b invasive disease, pneumococcal pneumonia and meningitis, rotavirus enteritis, measles, rubella, yellow fever, and human papillomavirus-associated cervical malignancy.
For the Clinical Officers Council (COC) Pre-Internship Examination, candidates must demonstrate flawless recall of vaccination timetables, precise routes, dosages, and anatomical sites, alongside rigorous knowledge of the cold chain, freeze-damage detection (the Shake Test), and Vaccine Vial Monitor (VVM) interpretation.
1. Complete Kenya Immunization Timetable (Birth to 10 Years)
The table below details the official national schedule administered at Child Welfare Clinics (CWCs) across Kenya:
| Age of Child | Vaccine Name | Target Antigens Included | Dose Volume | Route | Anatomical Site |
|---|---|---|---|---|---|
| At Birth (Within 2 weeks) | BCG | Mycobacterium bovis (attenuated strain) | 0.05 mL (0.1 mL if > 1 year) | Intradermal (ID) | Right upper arm (insertion of deltoid) |
| At Birth (Within 2 weeks) | OPV 0 (Birth Dose) | Live attenuated poliovirus types 1 and 3 | 2 drops | Oral | Directly into mouth |
| 6 Weeks | Pentavalent 1 | DTP-HepB-Hib | 0.5 mL | Intramuscular (IM) | Left upper anterolateral thigh |
| OPV 1 | Poliovirus types 1 and 3 | 2 drops | Oral | Directly into mouth | |
| PCV-10 1 | 10-valent Pneumococcal Conjugate | 0.5 mL | Intramuscular (IM) | Right upper anterolateral thigh | |
| ROTAVAC 1 | Live attenuated Rotavirus (monovalent 116E) | 5 drops | Oral | Directly into mouth | |
| 10 Weeks | Pentavalent 2 | DTP-HepB-Hib | 0.5 mL | Intramuscular (IM) | Left upper anterolateral thigh |
| OPV 2 | Poliovirus types 1 and 3 | 2 drops | Oral | Directly into mouth | |
| PCV-10 2 | 10-valent Pneumococcal Conjugate | 0.5 mL | Intramuscular (IM) | Right upper anterolateral thigh | |
| ROTAVAC 2 | Live attenuated Rotavirus | 5 drops | Oral | Directly into mouth | |
| 14 Weeks | Pentavalent 3 | DTP-HepB-Hib | 0.5 mL | Intramuscular (IM) | Left upper anterolateral thigh |
| OPV 3 | Poliovirus types 1 and 3 | 2 drops | Oral | Directly into mouth | |
| PCV-10 3 | 10-valent Pneumococcal Conjugate | 0.5 mL | Intramuscular (IM) | Right upper anterolateral thigh | |
| ROTAVAC 3 | Live attenuated Rotavirus | 5 drops | Oral | Directly into mouth | |
| IPV 1 | Inactivated Poliovirus (Types 1, 2, 3) | 0.5 mL | Intramuscular (IM) | Right upper anterolateral thigh (2.5 cm apart from PCV-10) | |
| 6 Months | Vitamin A | Retinol Palmitate | 100,000 IU (Blue capsule) | Oral | Nipple snipped, drops into mouth |
| Malaria vaccine, dose 1 | R21/Matrix-M P. falciparum pre-erythrocytic antigen | 0.5 mL | Intramuscular (IM) | Anterolateral thigh (malaria-endemic sub-counties only) | |
| 7 Months | Malaria vaccine, dose 2 | R21/Matrix-M | 0.5 mL | Intramuscular (IM) | Anterolateral thigh (endemic sub-counties only) |
| 9 Months | MR 1 | Measles and Rubella (live attenuated) | 0.5 mL | Subcutaneous (SC) | Right upper deltoid |
| IPV 2 | Inactivated Poliovirus (Types 1, 2, 3) | 0.5 mL | Intramuscular (IM) | Anterolateral thigh — added from 1 November 2025 | |
| Malaria vaccine, dose 3 | R21/Matrix-M | 0.5 mL | Intramuscular (IM) | Anterolateral thigh (endemic sub-counties only) | |
| Yellow Fever | 17D live attenuated strain | 0.5 mL | Subcutaneous (SC) | Left upper deltoid (Restricted to high-risk endemic ASAL counties) | |
| 12 Months | Deworming | Albendazole (or Mebendazole 500 mg) | 400 mg (200 mg if 12–23m per some protocols) | Oral | Chewable tablet |
| Vitamin A | Retinol Palmitate | 200,000 IU (Red capsule) | Oral | Nipple snipped, drops into mouth | |
| 18 Months | MR 2 | Measles and Rubella (Second Dose) | 0.5 mL | Subcutaneous (SC) | Right upper deltoid |
| 24 Months | Malaria vaccine, dose 4 | R21/Matrix-M | 0.5 mL | Intramuscular (IM) | Anterolateral thigh (endemic sub-counties only) |
| 10 Years | HPV (Adolescent Girls) | Human Papillomavirus types 16 and 18 | 0.5 mL | Intramuscular (IM) | Left deltoid — single dose from 1 November 2025 |
Three Schedule Changes That Took Effect on 1 November 2025
Kenya revised the routine schedule in the 2025/2026 financial year. Any revision material, chart booklet, or past paper printed before November 2025 is out of date on these three points, and they are exactly the kind of detail an examiner uses to separate current candidates from those revising off old notes:
| What changed | Before | From 1 November 2025 |
|---|---|---|
| HPV | 2 doses at 10 years, 6 months apart | 1 dose at 10 years |
| IPV | 1 dose at 14 weeks | 2 doses — 14 weeks and 9 months |
| Malaria vaccine | RTS,S/AS01, subnational pilot geography | R21/Matrix-M, expanded to more sub-counties in endemic zones |
- HPV single dose. WHO's Strategic Advisory Group of Experts concluded that one dose gives equally effective, durable protection against the oncogenic HPV types that cause cervical cancer. Kenya adopted this in November 2025. A single visit doubles the number of girls who can be protected with the same resources and removes the second-visit cost that drove most of the previous drop-off.
- IPV second dose (IPV 2) at 9 months. Added in line with WHO and Global Polio Eradication Initiative recommendations to strengthen type-2 humoral immunity as part of the polio endgame strategy. Note the practical consequence at the 9-month visit: the child now receives MR 1, IPV 2, yellow fever where applicable, and malaria dose 3 in endemic sub-counties. Use separate syringes and sites, and space injections at least 2.5 cm apart in the same limb.
- Malaria vaccine. Kenya was one of three Malaria Vaccine Implementation Programme pilot countries and introduced RTS,S/AS01 in 2019 in selected western sub-counties. From November 2025 the programme transitioned to the R21/Matrix-M formulation and expanded geographically. The schedule is a 4-dose series at 6, 7, 9 and 24 months, delivered only in designated malaria-endemic sub-counties — it is not a national-schedule vaccine, and dose 4 at 24 months is the dose most commonly missed because it falls outside the routine infant visits.
2. Technical Administration Guidelines & Clinical Nuances
BCG (Bacille Calmette-Guérin)
- Dilution & Storage: Reconstituted with supplied physiological saline diluent. Must be protected from direct sunlight (photolabile) and used within 6 hours of reconstitution.
- Injection Technique: Administered strictly intradermally on the right upper arm at the insertion of the deltoid, using a 26G or 27G short-bevel needle held bevel-up at a 10° to 15° angle to the skin. Correct administration produces a pale, blanched, pitted intradermal wheal measuring 5 to 8 mm ('orange-peel' appearance).
- Normal BCG Evolution:
- Immediate: Transient wheal that flattens within 30 minutes.
- 2 to 3 weeks: Indurated, erythematous papule develops at injection site.
- 5 to 6 weeks: Papule softens, ulcerates, and discharges serous fluid.
- 8 to 12 weeks: Ulcer spontaneously dries and forms a crust, leaving a permanent, flat or slightly depressed BCG scar measuring 3 to 7 mm.
- Clinical Pitfalls: Subcutaneous administration causes deep abscesses and suppurative regional axillary lymphadenitis (BCG-oma). Do not apply ointments, antibiotics, or bandages over the normal BCG lesion; counsel mother to leave it uncovered.
OPV vs. IPV Polio Eradication Strategy
- OPV (Bivalent Oral Poliovirus Vaccine): Contains attenuated type 1 and type 3 polioviruses. Secretes secretory IgA on the intestinal mucosa, preventing wild virus replication and gut shedding. It is delivered as 2 drops directly onto the child's tongue.
- OPV 0 (Birth Dose): Must be given within the first 14 days of life. If an infant presents after 14 days without OPV 0, do not give OPV 0; start directly with OPV 1 at 6 weeks.
- IPV (Inactivated Poliovirus Vaccine): Kenya now gives two doses — IPV 1 at 14 weeks and IPV 2 at 9 months, each 0.5 mL IM — following the schedule change of 1 November 2025. IPV contains inactivated types 1, 2, and 3 virus. Because type 2 was withdrawn from OPV to eliminate Vaccine-Associated Paralytic Poliomyelitis (VAPP) and circulating Vaccine-Derived Polioviruses (cVDPV), IPV provides the systemic humoral immunity against type 2 poliovirus that bivalent OPV cannot. The second dose was added because one dose leaves a measurable proportion of children seronegative to type 2.
Rotavirus Vaccine (ROTAVAC)
- Kenya utilizes the live attenuated monovalent 116E strain (ROTAVAC), administered as 5 drops orally at 6, 10, and 14 weeks. If an infant spits out the drops immediately, re-administer the dose once gently.
Measles-Rubella (MR 1 and MR 2)
- Given at 9 months (MR 1) and 18 months (MR 2) to address primary vaccine failure (approximately 10–15% of infants fail to seroconvert at 9 months due to lingering maternal transplacental antibodies). Administered subcutaneously into the right upper deltoid at a 45° angle using a 25G needle.
Malaria Vaccine (R21/Matrix-M)
- Who gets it: infants in designated malaria-endemic sub-counties only, concentrated in the lake-endemic and coastal-endemic zones. A child born in Nairobi or Turkana does not receive it on the routine schedule; a child in Homa Bay or Busia does.
- Schedule: 4 doses at 6, 7, 9 and 24 months, 0.5 mL IM into the anterolateral thigh.
- Why it starts at 6 months and not 6 weeks: efficacy in the 6–12-week co-administration age group was too low to justify infant-schedule delivery, so the series was designed to begin around 5–6 months.
- Counselling point: the vaccine reduces but does not abolish malaria risk. Insecticide-treated nets, indoor residual spraying, intermittent preventive treatment in pregnancy, and prompt testing and treatment all continue unchanged. Parents who believe a vaccinated child cannot get malaria present late with severe disease.
HPV Vaccine
- Single dose at 10 years for girls, from 1 November 2025 (previously 2 doses 6 months apart).
- Protects against the oncogenic HPV types responsible for the majority of cervical cancer, which remains a leading cancer killer of Kenyan women.
- Given intramuscularly into the deltoid. It is freeze-sensitive — never let it freeze.
Yellow Fever Endemic Counties in Kenya
Yellow fever vaccination is not universally administered across all 47 counties; it is routinely given at 9 months in designated high-risk counties along the Rift Valley and Lake Victoria basin: Baringo, Elgeyo Marakwet, West Pokot, Turkana, Kisumu, and Kericho.
3. Vaccine Cold Chain Logistics
The cold chain is the continuous, temperature-controlled supply chain system that ensures vaccines maintain their biochemical potency and immunological efficacy from the point of manufacture to the point of administration.
COLD CHAIN TEMPERATURE ZONES
Temperature Level Vaccine Types Stored
─────────────────────────────────────────────────────────────────────────────
-15°C to -25°C • OPV (At National & Regional Bulk Depots)
(Deep Freeze)
─────────────────────────────────────────────────────────────────────────────
+2°C to +8°C • ALL VACCINES at Health Center / Dispensary level
(Standard Refrigerator Target) • Pentavalent, PCV-10, Td, HPV, HepB
• BCG, MR, Yellow Fever, ROTAVAC, IPV
─────────────────────────────────────────────────────────────────────────────
> +8°C • Cold chain breach: High risk of heat inactivation
< +2°C • Freezing breach: Destroys aluminum-adsorbed vaccines!
Facility Refrigerator Management
- Target Temperature: Maintained strictly between +2.0°C and +8.0°C.
- Temperature Monitoring: Read twice daily (morning at 08:00 and evening at 16:00, including weekends and public holidays) using a calibrated 30-day electronic temperature logger (Fridge-tag 2) or alcohol thermometer mounted in the middle shelf. Recorded on a standardized MOH 335 Temperature Chart.
- Storage Layout Rules:
- Top Shelf / Freezer Compartment: Ice packs for conditioning; OPV may be frozen only at bulk depots.
- Upper / Middle Shelves (+2°C to +4°C): Heat-sensitive, freeze-tolerant live viral vaccines (OPV, Measles-Rubella, BCG, Yellow Fever).
- Lower Shelves (+4°C to +8°C): Freeze-sensitive, aluminum-adsorbed vaccines (Pentavalent, PCV-10, Td, HPV, HepB, IPV).
- Bottom Shelf / Crisper: Filled with chilled bottles of water to stabilize interior temperature during power outages. Never place vaccines in the door compartments or bottom crisper.
4. Freeze Sensitivity & The Shake Test Protocol
Freeze-Sensitive vs. Freeze-Tolerant Vaccines
FREEZE-SENSITIVE VACCINES FREEZE-TOLERANT VACCINES
(NEVER ALLOW TO FREEZE!) (Can withstand freezing)
─────────────────────────────── ──────────────────────────────
• Pentavalent (DTP-HepB-Hib) • OPV (Oral Poliovirus)
• PCV-10 (Pneumococcal) • BCG (Freeze-dried)
• Td / TT (Tetanus Toxoid) • Measles-Rubella (Lyophilized)
• HPV (Human Papillomavirus) • Yellow Fever (Lyophilized)
• Hepatitis B
• IPV (Inactivated Polio)
Pathophysiology of Freeze Damage: Vaccines containing aluminum adjuvants (aluminum hydroxide or aluminum phosphate) form a delicate colloidal suspension. If frozen below 0°C, ice crystals crush the aluminum lattice, irreversibly breaking the bond between the adjuvant and the microbial antigen. The adjuvant forms heavy, insoluble granules that fall out of suspension, permanently destroying vaccine immunogenicity and markedly increasing the risk of sterile subcutaneous abscesses.
The Shake Test Step-by-Step Protocol
When a refrigerator breaches < 0°C or freeze-indicators (Freeze-tag / Freeze-check) trigger, the clinician must conduct the Shake Test before discarding suspected vials:
SHAKE TEST WORKFLOW:
[Step 1: PREPARE CONTROL VIAL]
• Take a vial of the identical vaccine from the same manufacturer and lot number.
• Deliberately freeze it solid at -20°C for 24 hours, then thaw completely at room temperature.
• Clearly mark it: "FROZEN CONTROL".
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[Step 2: SELECT TEST VIAL]
• Take the suspected vial from the compromised refrigerator.
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▼
[Step 3: SHAKE TOGETHER]
• Hold both vials in one hand and shake vigorously for 10 to 15 seconds.
│
▼
[Step 4: OBSERVE SEDIMENTATION]
• Place both vials side by side on a flat, well-lit surface.
• Observe settling behavior at 5, 15, and 30 minutes.
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▼
[Step 5: INTERPRETATION]
• TEST VIAL SETTLES SLOWLY (Remains cloudy much longer than control):
► PASSED: Vaccine was NOT freeze-damaged -> Safe to use.
• TEST VIAL SETTLES RAPIDLY (Sediments and clears at same rate or faster than control):
► FAILED: Vaccine WAS frozen and damaged -> DISCARD IMMEDIATELY.
5. Vaccine Vial Monitor (VVM) & Multi-Dose Vial Policy
Vaccine Vial Monitor (VVM) Stages
The VVM is a temperature-sensitive label comprising an inner white square surrounded by an outer purple reference circle. It reflects cumulative heat exposure over time.
| VVM Stage | Visual Appearance of Inner Square | Meaning & Action Required |
|---|---|---|
| Stage 1 | Inner square is noticeably lighter than outer circle | Vaccine has received negligible heat exposure; USABLE. |
| Stage 2 | Inner square has darkened slightly, but remains distinctly lighter than outer circle | Vaccine has experienced moderate heat exposure but remains potent; USABLE (prioritize for use before Stage 1 vials). |
| Stage 3 | Inner square matches the color of the outer circle (DISCARD THRESHOLD) | Vaccine has reached its heat threshold and lost potency; DO NOT USE - DISCARD IMMEDIATELY. |
| Stage 4 | Inner square is noticeably darker than outer circle | Vaccine has suffered severe heat exposure; DO NOT USE - DISCARD IMMEDIATELY. |
Exam Key: Even if the manufacturer's calendar expiration date stamped on the vial has not passed, a vial with a VVM at Stage 3 or Stage 4 must be destroyed immediately.
Multi-Dose Vial Policy (MDVP)
The Kenya NVIP distinguishes between opened multi-dose vials of liquid injectable vaccines versus reconstituted lyophilized vaccines:
- Reconstituted Freeze-Dried Vaccines (BCG, Measles-Rubella, Yellow Fever):
- Strict Rule: Must be DISCARDED within 6 hours of reconstitution or at the end of the immunization session, whichever comes first.
- Rationale: These vaccines contain no antimicrobial preservatives. Unused reconstituted vials are prone to Staphylococcus aureus colonization, which can cause fatal pediatric Toxic Shock Syndrome (TSS).
- Liquid Injectable Vaccines (Pentavalent, PCV-10, OPV, Td, IPV):
- Opened vials may be retained and used for up to 28 days, provided that:
- The expiration date has not passed.
- Stored continuously between +2°C and +8°C.
- The VVM has not reached Stage 3 or 4.
- The vial septum was not submerged in water and strict aseptic technique was maintained.
- Opened vials may be retained and used for up to 28 days, provided that:
A mother brings her healthy 14-week-old infant to the Child Welfare Clinic in Machakos County for routine KEPI vaccinations. According to the current Kenya National Vaccines and Immunization Program schedule, which combination of vaccines, dosages, and routes should be administered at this visit?
During a routine morning cold chain inspection at a primary health dispensary, the immunization officer examines a box of 10-dose Measles-Rubella vaccine vials. On one vial, the square inside the Vaccine Vial Monitor (VVM) has darkened such that its color exactly matches the surrounding purple circle. The manufacturer expiration date stamped on the vial is 6 months away. What is the correct interpretation and required action?
Following a power failure in a health center refrigerator where the temperature dropped below -4°C overnight, a clinical officer suspects that vials of Pentavalent (DTP-HepB-Hib) vaccine may have frozen. To determine whether the vaccines were damaged, the officer performs a Shake Test against a deliberately frozen and thawed control vial from the same manufacturer. Which observation confirms that the test vial has suffered freeze damage and must be discarded?
A health facility conducts a morning immunization outreach session using multi-dose vials of liquid Pentavalent vaccine and lyophilized (freeze-dried) BCG vaccine. At the end of the 6-hour clinic session, several doses remain in both opened vials. According to the WHO and Kenya Multi-Dose Vial Policy (MDVP), how should these two opened vials be managed?